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Algorithms on Strings, Trees and Sequences: Computer Science and Computational Biology Dan Gusfield
Publisher: Cambridge University Press

Algorithms on Strings, Trees and Sequences: Computer Science and Computational Biology. Pattern Matching Algorithms (Algorithms on Strings, Trees and Sequences: Computer Science and Computational Biology). This textbook is intended for students enrolled in courses in computational biology or bioinformatics as well as for molecular biologists, mathematicians, and computer scientists. The computation of statistical indexes containing subword frequency counts, expectations, and scores thereof, arises routinely in the analysis of biological sequences. Http://stackoverflow.com/questions/13603793/discovering-consecutive-repetitive-patterns-in-a-string . Accordingly, the first part of the book deals with classical methods of sequence analysis: pairwise alignment, exact string matching, multiple alignment, and hidden Markov models. The suffix tree for a string S is a tree whose edges are labeled . Your Price: $75.00- Algorithms on Strings, Trees and Sequences: Computer Science and Computational Biology. Admin | December 28th, 2011 - 4:59 am. Analyzing massive amounts of data officially became a national priority recently when the White House Office of Science and Technology Policy announced the Big Data Research and Development Initiative. Gusfield, Algorithms on strings, trees and sequences. A multi-disciplinary team of University of Missouri researchers rose to the big data challenge when they solved a major biological question by using a groundbreaking computer algorithm to find identical DNA sequences in different plant and animal species. USA: Cambridge University Press. (1997) Algorithms on strings, trees and sequences: computer science and computational biology, Cambridge Univ. Mitchinson, Biological Sequence Analysis, Cambridge University Press, 1998; D. In the second part evolutionary time takes center stage a number of key concepts developed by the authors. 1 Department of Computer Science, College of Information Science and Technology, University of Nebraska at Omaha, Omaha, NE68182-0116, USA. In computer science, a suffix tree (also called suffix trie, PAT tree or, in an earlier form, position tree) is a data structure that presents the suffixes of a given string in a way that allows for a particularly fast implementation of many important string operations. Algorithms on Strings, Trees and Sequences: Computer Science and Computational Biology Download eBook Online.